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Installing Cufflinks (RNA-Seq) on Ubuntu

So, you have a ton of hard-disks spinning with RNA Seq data you need to analyse? Excellent. But first you need some software to do that. This post follows the nature protocol described by Trapnell et el. described here (something freely accessible from nature publishing group – must be my lucky day today).

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Bioinformatics Big Data Hackathon

Note: I should have written this ages ago, but only now has the cold weather caught up with my nocturnal habits.

As part of the first keystone summer school we organised a summer school over four days in July 2015 at the University of Malta.  The summer school was titled Keyword Search over Big Data and I was asked to help with organising the one-and-a-half-day big data hackathon.  With my bioinformatics hat on, it was easy to fish for “big data” for the event.

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