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start [2018/10/09 10:12] – external edit 127.0.0.1 | start [2023/08/09 12:49] (current) – jp |
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====== How to ====== | ====== How to ====== |
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You can reach me by email at my idea of a spam-proof address here: | This wiki is really my digital notebook of things I found useful and weren't one google/stackoverflow/chatgpt search away. |
<code bash>echo "jp.is.king" | perl -ne "s/\./@/g; print" | | |
perl -ne "s/is\@king/javaclass/g; print" | perl -ne "s/$/.co.uk/; print"</code> | |
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If you got here by mistake, and instead are interested in the Computational Life Sciences research group at the University of Malta [[cls|click here]]. | You can reach me on [[https://twitter.com/dr_jpe|twitter]] or via email at my idea of a spam-proof address here: |
| <code bash>echo "jp.is.king" | perl -ne "s/\./@/g; print" | perl -ne "s/is\@king/bitsilla/g; print" | perl -ne "s/$/.com/; print"</code> |
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Below find some common tasks I keep returning to or are of general interest (or scarce on the www). | Below find some common tasks I keep returning to or are of general interest (or scarce on the www). |
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| ===== Anaconda (Python) ===== |
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| * How do I [[howto:create_python_environment_for_study_unit_xxx|create a python environment for study unit XXX1234]]? |
| * How do I [[howto:export_an_anaconda_environment_to_a_file|export an Anaconda environment to a file (for distribution)]]? |
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===== Cassandra ===== | ===== Cassandra ===== |
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* How do I [[howto:cassandra_install|install cassandra]]? | * How do I [[howto:cassandra_install|install cassandra]]? |
* How do I [[howto:cassandra_fix_upgrade_ubuntu|fix Cassandra after an Ubuntu upgrade]]? | * How do I [[howto:cassandra_fix_upgrade_ubuntu|fix Cassandra after an Ubuntu upgrade]]? |
* How do I [[howto:linux_split_file_first_col|split a file based on the first column (e.g. of a csv file)]]? | * How do I [[howto:linux_split_file_first_col|split a file based on the first column (e.g. of a csv file)]]? |
* How do I [[howto:linux_insert_header_in_all_files|insert the same header in all files]]? | * How do I [[howto:linux_insert_header_in_all_files|insert the same header in all files]]? |
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| ===== Git ===== |
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| * How do I [[howto:git_create_tag_from_branch|create a tag from a branch (and remove the branch)]] ? |
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| ===== JupyterHub ===== |
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| * How do I [[howto:jupyterhub_run|run JupyterHub on Titan]] ? |
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===== Molgenis (Life sciences software) ===== | ===== Molgenis (Life sciences software) ===== |
===== PyMOL ===== | ===== PyMOL ===== |
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| * How do I [[howto:pymol_install_on_windows|install PyMOL on windows]] ? |
* How do I [[howto:pymol_select_by_res_from_obj|select all residues within n distance from an object]] ? | * How do I [[howto:pymol_select_by_res_from_obj|select all residues within n distance from an object]] ? |
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| ===== RClone ===== |
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| * How do I [[howto:rclone_copy_shared_folder_locally|copy a "shared with me" directory locally]] ? |
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===== Rocks Cluster ===== | ===== Rocks Cluster ===== |
* How do I [[howto:rocks_install_package_rpm|install an RPM across all compute nodes (on kickstart)]]? | * How do I [[howto:rocks_install_package_rpm|install an RPM across all compute nodes (on kickstart)]]? |
* How do I [[howto:rocks_create_package_rpm|create an RPM package from an existing directory (how to package a program)]]? | * How do I [[howto:rocks_create_package_rpm|create an RPM package from an existing directory (how to package a program)]]? |
| * How do I [[howto:rocks_ftp_a_file_from_head_to_compute_nodes_on_installation|FTP a file from head to compute nodes on installation]]? |
| * How do I [[howto:rocks_configure_the_second_ethernet_card_on_compute_nodes|configure the second ethernet card on compute nodes so that the rest of the intranet (and internet) is available to compute nodes]]? |
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| ===== University of Malta ===== |
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| * How do I [[howto:vpn_install_arch|install UM's VPN on Arch Linux]]? |
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| ===== Virtual Machines ===== |
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| * How do I [[howto:vm_install_lubuntu|install and run Lubuntu in a Virtual Machine]]? |
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| ===== Wordpress ===== |
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| * How do I [[howto:wordpress_reset_theme|reset a theme in Wordpress (like fresh install)]]? |